Documentation CQDG — Versions https://your-docusaurus-site.example.com/en/versions Notes de version du portail et des données du Centre Québécois de Données Génomiques. Tue, 26 May 2026 00:00:00 GMT https://validator.w3.org/feed/docs/rss2.html https://github.com/jpmonette/feed en <![CDATA[📊 CQDG Data version 2.1]]> https://your-docusaurus-site.example.com/en/versions/donnees-cqdg-version-2.1 https://your-docusaurus-site.example.com/en/versions/donnees-cqdg-version-2.1 Tue, 26 May 2026 00:00:00 GMT

A data update is now available on the CQDG portal!

Dictionary v5.5

Each study has been updated to the latest version of the dictionary (BACQ, CARTaGENE, DEE, NeuroDev, PRAGMatIQ)

]]> <![CDATA[🚀 CQDG Platform version 2.0]]> https://your-docusaurus-site.example.com/en/versions/plateforme-cqdg-version-2.0 https://your-docusaurus-site.example.com/en/versions/plateforme-cqdg-version-2.0 Tue, 26 May 2026 00:00:00 GMT

A CQDG portal update is now available!

New features

  • The data model and submission process now support user-submitted file metadata (e.g., experiments, sequencing analyses, and files for sequencing experiments)

Changes

  • Updated the data dictionary to version 5.5 with file metadata and improved documentation
  • Added new filters in the data explorer (e.g., analysis type, programs)
  • The sequencing platform field now accepts more options
  • The capture kit field on the data files page now contains metadata from the target_capture_kit field provided by the submitter

Fixes

  • Pipeline definitions now accept and display lists
  • Fixed the supported values in the reference genome version field
  • Fixed links in the variant explorer that changed color on mouse hover
  • Fixed the handling of restricted studies
]]> <![CDATA[📊 CQDG Data Release version 2.0]]> https://your-docusaurus-site.example.com/en/versions/donnees-cqdg-version-2.0 https://your-docusaurus-site.example.com/en/versions/donnees-cqdg-version-2.0 Thu, 17 Jul 2025 00:00:00 GMT

A new data release is now available on the CQDG portal

BACQ and NeuroDev studies

  • New quality control on alignment files
  • New analysis with nf-core/sarek v3.4.4 and Ferlab post-processing pipelines
  • Annotated variant files (Ensembl VEP) are now available
  • New sequences:
    • BACQ: 80 new exomes
    • NeuroDev: 297 new genomes
  • New metadata available for -omics files in the Data Explorer
]]> <![CDATA[📊 CQDG Data version 1.0]]> https://your-docusaurus-site.example.com/en/versions/donnees-cqdg-version-1.0 https://your-docusaurus-site.example.com/en/versions/donnees-cqdg-version-1.0 Thu, 02 May 2024 00:00:00 GMT

With the launch of the portal, the CQDG is proud to provide researchers with a first dataset representing more than 3,300 participants from five studies: CARTaGENE, DEE, BACQ, NeuroDev, and PRAGMatIQ.

This includes more than 84TB of genomic data from 2,944 whole genome sequencing (WGS) runs and 386 whole exome sequencing (WXS) runs.

The portal also offers a bank of more than 90M annotated germline variants.

Explore it all at https://portail.cqdg.ca

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